Search details
1.
CheckM2: a rapid, scalable and accurate tool for assessing microbial genome quality using machine learning.
Nat Methods
; 20(8): 1203-1212, 2023 08.
Article
in English
| MEDLINE | ID: mdl-37500759
2.
Genome-centric view of carbon processing in thawing permafrost.
Nature
; 560(7716): 49-54, 2018 08.
Article
in English
| MEDLINE | ID: mdl-30013118
3.
Author Correction: CheckM2: a rapid, scalable and accurate tool for assessing microbial genome quality using machine learning.
Nat Methods
; 21(4): 735, 2024 Apr.
Article
in English
| MEDLINE | ID: mdl-38514780
4.
Sequenceserver: A Modern Graphical User Interface for Custom BLAST Databases.
Mol Biol Evol
; 36(12): 2922-2924, 2019 12 01.
Article
in English
| MEDLINE | ID: mdl-31411700
5.
Methane dynamics regulated by microbial community response to permafrost thaw.
Nature
; 514(7523): 478-81, 2014 Oct 23.
Article
in English
| MEDLINE | ID: mdl-25341787
6.
GraftM: a tool for scalable, phylogenetically informed classification of genes within metagenomes.
Nucleic Acids Res
; 46(10): e59, 2018 06 01.
Article
in English
| MEDLINE | ID: mdl-29562347
7.
OrfM: a fast open reading frame predictor for metagenomic data.
Bioinformatics
; 32(17): 2702-3, 2016 09 01.
Article
in English
| MEDLINE | ID: mdl-27153669
8.
The Amphimedon queenslandica genome and the evolution of animal complexity.
Nature
; 466(7307): 720-6, 2010 Aug 05.
Article
in English
| MEDLINE | ID: mdl-20686567
9.
Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals.
Nature
; 455(7217): 1193-7, 2008 Oct 30.
Article
in English
| MEDLINE | ID: mdl-18830242
10.
Methylotrophy in the Mire: direct and indirect routes for methane production in thawing permafrost.
mSystems
; 9(1): e0069823, 2024 Jan 23.
Article
in English
| MEDLINE | ID: mdl-38063415
11.
Biogem: an effective tool-based approach for scaling up open source software development in bioinformatics.
Bioinformatics
; 28(7): 1035-7, 2012 Apr 01.
Article
in English
| MEDLINE | ID: mdl-22332238
12.
Anaerobic methanotroph 'Candidatus Methanoperedens nitroreducens' has a pleomorphic life cycle.
Nat Microbiol
; 8(2): 321-331, 2023 02.
Article
in English
| MEDLINE | ID: mdl-36635574
13.
Taxonomic and carbon metabolic diversification of Bathyarchaeia during its coevolution history with early Earth surface environment.
Sci Adv
; 9(27): eadf5069, 2023 07 07.
Article
in English
| MEDLINE | ID: mdl-37406125
14.
A functional microbiome catalog crowdsourced from North American rivers.
bioRxiv
; 2023 Jul 26.
Article
in English
| MEDLINE | ID: mdl-37502915
15.
Marked changes in neuropeptide expression accompany broadcast spawnings in the gastropod Haliotis asinina.
Front Zool
; 9(1): 9, 2012 May 09.
Article
in English
| MEDLINE | ID: mdl-22571815
16.
Recoding of stop codons expands the metabolic potential of two novel Asgardarchaeota lineages.
ISME Commun
; 1(1): 30, 2021 Jun 28.
Article
in English
| MEDLINE | ID: mdl-36739331
17.
Successional dynamics and alternative stable states in a saline activated sludge microbial community over 9 years.
Microbiome
; 9(1): 199, 2021 10 06.
Article
in English
| MEDLINE | ID: mdl-34615557
18.
Diverse sediment microbiota shape methane emission temperature sensitivity in Arctic lakes.
Nat Commun
; 12(1): 5815, 2021 10 05.
Article
in English
| MEDLINE | ID: mdl-34611153
19.
Drug target prediction and prioritization: using orthology to predict essentiality in parasite genomes.
BMC Genomics
; 11: 222, 2010 Apr 03.
Article
in English
| MEDLINE | ID: mdl-20361874
20.
Automated organelle-based colocalization in whole-cell imaging.
Cytometry A
; 75(11): 941-50, 2009 Nov.
Article
in English
| MEDLINE | ID: mdl-19746416